A diverse host thrombospondin-type-1 repeat protein repertoire promotes symbiont colonization during establishment of cnidarian-dinoflagellate symbiosis

  1. Emilie-Fleur Neubauer
  2. Angela Z Poole
  3. Philipp Neubauer
  4. Olivier Detournay
  5. Kenneth Tan
  6. Simon K Davy  Is a corresponding author
  7. Virginia M Weis  Is a corresponding author
  1. Victoria University of Wellington, New Zealand
  2. Western Oregon University, United States
  3. Dragonfly Data Science, New Zealand
  4. Planktovie sas, France
  5. Oregon State University, United States

Abstract

The mutualistic endosymbiosis between cnidarians and dinoflagellates is mediated by complex inter-partner signaling events, where the host cnidarian innate immune system plays a crucial role in recognition and regulation of symbionts. To date, little is known about the diversity of thrombospondin-type-1 repeat (TSR) domain proteins in basal metazoans and or their potential role in regulation of cnidarian-dinoflagellate mutualisms. We reveal a large and diverse repertoire of TSR proteins in seven anthozoan species, and show that in the model sea anemone Aiptasia pallida the TSR domain promotes colonization of the host by the symbiotic dinoflagellate Symbiodinium minutum. Blocking TSR domains led to decreased colonization success, while adding exogenous TSRs resulted in a 'super colonization'. Furthermore, gene expression of TSR proteins was highest at early time-points during symbiosis establishment. Our work characterizes the diversity of cnidarian TSR proteins and provides evidence that these proteins play an important role in the establishment of cnidarian-dinoflagellate symbiosis.

Data availability

The following previously published data sets were used
    1. Kitchen SA
    2. Crowder CM
    3. Poole AZ
    4. Weis VM
    5. Meyer E
    (2015) Data from: De novo assembly and characterization of four anthozoan (phylum Cnidaria) transcriptomes
    Available at Dryad Digital Repository under a CC0 Public Domain Dedication. This work used the following resource built from this data: http://people.oregonstate.edu/~meyere/data.htm.
    1. Lehnert EM
    2. Burriesci MS
    3. Pringle JR
    (2012) Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida
    Publicly available at the NCBI Sequence Read Archive (accession no. SRR696721). This work used the following resource built from this data: http://pringlelab.stanford.edu/projects.html.
    1. Baumgarten S
    2. Simakov O
    3. Esherick LY
    4. Liew YJ
    5. Lehnert EM
    6. Michell CT
    7. Li Y
    8. Hambleton EA
    9. Guse A
    10. Oates ME
    11. Gough J
    12. Weis VM
    13. Aranda M
    14. Pringle JR
    15. Voolstra CR
    (2015) The genome of Aiptasia, a sea anemone model for coral symbiosis
    Publicly available at NCBI BioProject (accession no. PRJNA261862). This work uses the following resource built from this data: http://aiptasia.reefgenomics.org/.
    1. Shinzato C
    2. Shoguchi E
    3. Kawashima T
    4. Hamada M
    5. Hisata K
    6. Tanaka M
    7. Fujie M
    8. Fujiwara M
    9. Koyanagi R
    10. Ikuta T
    11. Fujiyama A
    12. Miller DJ
    13. Satoh N
    (2011) Using the Acropora digitifera genome to understand coral responses to environmental change
    Publicly available at NCBI BioProject (accession no. PRJNA314803). This work uses the following resource built from this data: http://marinegenomics.oist.jp/coral/viewer/info?project_id=3.
    1. Shinzato C
    2. Shoguchi E
    3. Kawashima T
    4. Hamada M
    5. Hisata K
    6. Tanaka M
    7. Fujie M
    8. Fujiwara M
    9. Koyanagi R
    10. Ikuta T
    11. Fujiyama A
    12. Miller DJ
    13. Satoh N
    (2011) Using the Acropora digitifera genome to understand coral responses to environmental change
    Publicly available at NCBI BioProject (accession no. PRJDA67425). This work uses the following resource built from this data: http://marinegenomics.oist.jp/coral/viewer/info?project_id=3.
    1. Moya A
    2. Huisman L
    3. Ball EE
    4. Hayward DC
    5. Grasso LC
    6. Chua CM
    7. Woo HN
    8. Gattuso J-P
    9. Forêt S
    10. Miller DJ
    (2012) Whole transcriptome analysis of the coral Acropora millepora reveals complex responses to CO2-driven acidification during the initiation of calcification
    Publicly available at NCBI BioProject (accession no. PRJNA74409). This work uses the following resource built from this data: http://www.bio.utexas.edu/research/matz_lab/matzlab/Data.html.

Article and author information

Author details

  1. Emilie-Fleur Neubauer

    School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand
    Competing interests
    The authors declare that no competing interests exist.
  2. Angela Z Poole

    Department of Biology, Western Oregon University, Monmouth, United States
    Competing interests
    The authors declare that no competing interests exist.
  3. Philipp Neubauer

    Dragonfly Data Science, Wellington, New Zealand
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-4150-848X
  4. Olivier Detournay

    Planktovie sas, Allauch, France
    Competing interests
    The authors declare that no competing interests exist.
  5. Kenneth Tan

    Department of Integrative Biology, Oregon State University, Corvallis, United States
    Competing interests
    The authors declare that no competing interests exist.
  6. Simon K Davy

    School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand
    For correspondence
    Simon.Davy@vuw.ac.nz
    Competing interests
    The authors declare that no competing interests exist.
  7. Virginia M Weis

    Department of Integrative Biology, Oregon State University, Corvallis, United States
    For correspondence
    weisv@oregonstate.edu
    Competing interests
    The authors declare that no competing interests exist.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-1826-2848

Funding

National Science Foundation (IOB0919073)

  • Virginia M Weis

Victoria University of Wellington

  • Emilie-Fleur Neubauer

Oregon State University

  • Kenneth Tan

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Reviewing Editor

  1. Paul G Falkowski, Rutgers University, United States

Version history

  1. Received: December 21, 2016
  2. Accepted: April 29, 2017
  3. Accepted Manuscript published: May 8, 2017 (version 1)
  4. Accepted Manuscript updated: May 9, 2017 (version 2)
  5. Version of Record published: May 26, 2017 (version 3)

Copyright

© 2017, Neubauer et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 1,854
    views
  • 321
    downloads
  • 40
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Emilie-Fleur Neubauer
  2. Angela Z Poole
  3. Philipp Neubauer
  4. Olivier Detournay
  5. Kenneth Tan
  6. Simon K Davy
  7. Virginia M Weis
(2017)
A diverse host thrombospondin-type-1 repeat protein repertoire promotes symbiont colonization during establishment of cnidarian-dinoflagellate symbiosis
eLife 6:e24494.
https://doi.org/10.7554/eLife.24494

Share this article

https://doi.org/10.7554/eLife.24494

Further reading

    1. Ecology
    Ari Grele, Tara J Massad ... Lora A Richards
    Research Article

    Declines in biodiversity generated by anthropogenic stressors at both species and population levels can alter emergent processes instrumental to ecosystem function and resilience. As such, understanding the role of biodiversity in ecosystem function and its response to climate perturbation is increasingly important, especially in tropical systems where responses to changes in biodiversity are less predictable and more challenging to assess experimentally. Using large-scale transplant experiments conducted at five neotropical sites, we documented the impacts of changes in intraspecific and interspecific plant richness in the genus Piper on insect herbivory, insect richness, and ecosystem resilience to perturbations in water availability. We found that reductions of both intraspecific and interspecific Piper diversity had measurable and site-specific effects on herbivory, herbivorous insect richness, and plant mortality. The responses of these ecosystem-relevant processes to reduced intraspecific Piper richness were often similar in magnitude to the effects of reduced interspecific richness. Increased water availability reduced herbivory by 4.2% overall, and the response of herbivorous insect richness and herbivory to water availability were altered by both intra- and interspecific richness in a site-dependent manner. Our results underscore the role of intraspecific and interspecific richness as foundations of ecosystem function and the importance of community and location-specific contingencies in controlling function in complex tropical systems.

    1. Ecology
    Yang Ruan, Ning Ling ... Zhibiao Nan
    Research Article

    Warming and precipitation anomalies affect terrestrial carbon balance partly through altering microbial eco-physiological processes (e.g., growth and death) in soil. However, little is known about how such processes responds to simultaneous regime shifts in temperature and precipitation. We used the 18O-water quantitative stable isotope probing approach to estimate bacterial growth in alpine meadow soils of the Tibetan Plateau after a decade of warming and altered precipitation manipulation. Our results showed that the growth of major taxa was suppressed by the single and combined effects of temperature and precipitation, eliciting 40–90% of growth reduction of whole community. The antagonistic interactions of warming and altered precipitation on population growth were common (~70% taxa), represented by the weak antagonistic interactions of warming and drought, and the neutralizing effects of warming and wet. The members in Solirubrobacter and Pseudonocardia genera had high growth rates under changed climate regimes. These results are important to understand and predict the soil microbial dynamics in alpine meadow ecosystems suffering from multiple climate change factors.