Src activates retrograde membrane traffic through phosphorylation of GBF1

  1. Joanne Chia  Is a corresponding author
  2. Shyi-Chyi Wang
  3. Sheena Wee
  4. David James Gill
  5. Felicia Tay
  6. Srinivasaraghavan Kannan
  7. Chandra S Verma
  8. Jayantha Gunaratne
  9. Frederic A Bard  Is a corresponding author
  1. Institute of Molecular and Cell Biology, Singapore
  2. Bioinformatics Institute, Singapore

Abstract

The Src tyrosine kinase controls cancer-critical protein glycosylation through Golgi to ER relocation of GALNTs enzymes. How Src induces this trafficking event is unknown. Golgi to ER transport depends on the GTP Exchange factor (GEF) GBF1 and small GTPase Arf1. Here we show that Src induces the formation of tubular transport carriers containing GALNTs. The kinase phosphorylates GBF1 on 10 tyrosine residues; two of them, Y876 and Y898 are located near the C-terminus of the Sec7 GEF domain. Their phosphorylation promotes GBF1 binding to the GTPase; molecular modeling suggests partial melting of the Sec7 domain and intramolecular rearrangement. GBF1 mutants defective for these rearrangements prevent binding, carrier formation and GALNTs relocation, while phosphomimetic GBF1 mutants induce tubules. In sum, Src promotes GALNTs relocation by promoting GBF1 binding to Arf1. Based on residue conservation, similar regulation of GEF-Arf complexes by tyrosine phosphorylation could be a conserved and wide-spread mechanism.

Data availability

Source data of western blots and all quantifications have been provided for all figures.

Article and author information

Author details

  1. Joanne Chia

    Institute of Molecular and Cell Biology, Singapore, Singapore
    For correspondence
    zhchia@imcb.a-star.edu.sg
    Competing interests
    No competing interests declared.
  2. Shyi-Chyi Wang

    Institute of Molecular and Cell Biology, Singapore, Singapore
    Competing interests
    No competing interests declared.
  3. Sheena Wee

    Institute of Molecular and Cell Biology, Singapore, Singapore
    Competing interests
    No competing interests declared.
  4. David James Gill

    Institute of Molecular and Cell Biology, Singapore, Singapore
    Competing interests
    No competing interests declared.
  5. Felicia Tay

    Institute of Molecular and Cell Biology, Singapore, Singapore
    Competing interests
    No competing interests declared.
  6. Srinivasaraghavan Kannan

    Atomistic Simulations and Design in Biology, Bioinformatics Institute, Singapore, Singapore
    Competing interests
    No competing interests declared.
  7. Chandra S Verma

    Atomistic Simulations and Design in Biology, Bioinformatics Institute, Singapore, Singapore
    Competing interests
    No competing interests declared.
  8. Jayantha Gunaratne

    Institute of Molecular and Cell Biology, Singapore, Singapore
    Competing interests
    No competing interests declared.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-5377-6537
  9. Frederic A Bard

    Institute of Molecular and Cell Biology, Singapore, Singapore
    For correspondence
    fbard@imcb.a-star.edu.sg
    Competing interests
    Frederic A Bard, Reviewing editor, eLife.
    ORCID icon "This ORCID iD identifies the author of this article:" 0000-0002-3783-4805

Funding

Astar (Core fund)

  • Frederic A Bard

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.

Reviewing Editor

  1. Suzanne R Pfeffer, Stanford University School of Medicine, United States

Version history

  1. Preprint posted: August 3, 2020 (view preprint)
  2. Received: March 23, 2021
  3. Accepted: December 5, 2021
  4. Accepted Manuscript published: December 6, 2021 (version 1)
  5. Version of Record published: December 15, 2021 (version 2)

Copyright

© 2021, Chia et al.

This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited.

Metrics

  • 1,078
    views
  • 194
    downloads
  • 10
    citations

Views, downloads and citations are aggregated across all versions of this paper published by eLife.

Download links

A two-part list of links to download the article, or parts of the article, in various formats.

Downloads (link to download the article as PDF)

Open citations (links to open the citations from this article in various online reference manager services)

Cite this article (links to download the citations from this article in formats compatible with various reference manager tools)

  1. Joanne Chia
  2. Shyi-Chyi Wang
  3. Sheena Wee
  4. David James Gill
  5. Felicia Tay
  6. Srinivasaraghavan Kannan
  7. Chandra S Verma
  8. Jayantha Gunaratne
  9. Frederic A Bard
(2021)
Src activates retrograde membrane traffic through phosphorylation of GBF1
eLife 10:e68678.
https://doi.org/10.7554/eLife.68678

Share this article

https://doi.org/10.7554/eLife.68678

Further reading

    1. Cell Biology
    2. Neuroscience
    Mariana I Tsap, Andriy S Yatsenko ... Halyna R Shcherbata
    Research Article Updated

    Mutations in Drosophila Swiss cheese (SWS) gene or its vertebrate orthologue neuropathy target esterase (NTE) lead to progressive neuronal degeneration in flies and humans. Despite its enzymatic function as a phospholipase is well established, the molecular mechanism responsible for maintaining nervous system integrity remains unclear. In this study, we found that NTE/SWS is present in surface glia that forms the blood-brain barrier (BBB) and that NTE/SWS is important to maintain its structure and permeability. Importantly, BBB glia-specific expression of Drosophila NTE/SWS or human NTE in the sws mutant background fully rescues surface glial organization and partially restores BBB integrity, suggesting a conserved function of NTE/SWS. Interestingly, sws mutant glia showed abnormal organization of plasma membrane domains and tight junction rafts accompanied by the accumulation of lipid droplets, lysosomes, and multilamellar bodies. Since the observed cellular phenotypes closely resemble the characteristics described in a group of metabolic disorders known as lysosomal storage diseases (LSDs), our data established a novel connection between NTE/SWS and these conditions. We found that mutants with defective BBB exhibit elevated levels of fatty acids, which are precursors of eicosanoids and are involved in the inflammatory response. Also, as a consequence of a permeable BBB, several innate immunity factors are upregulated in an age-dependent manner, while BBB glia-specific expression of NTE/SWS normalizes inflammatory response. Treatment with anti-inflammatory agents prevents the abnormal architecture of the BBB, suggesting that inflammation contributes to the maintenance of a healthy brain barrier. Considering the link between a malfunctioning BBB and various neurodegenerative diseases, gaining a deeper understanding of the molecular mechanisms causing inflammation due to a defective BBB could help to promote the use of anti-inflammatory therapies for age-related neurodegeneration.

    1. Cancer Biology
    2. Cell Biology
    Dongyue Jiao, Huiru Sun ... Kun Gao
    Research Article

    Enhanced protein synthesis is a crucial molecular mechanism that allows cancer cells to survive, proliferate, metastasize, and develop resistance to anti-cancer treatments, and often arises as a consequence of increased signaling flux channeled to mRNA-bearing eukaryotic initiation factor 4F (eIF4F). However, the post-translational regulation of eIF4A1, an ATP-dependent RNA helicase and subunit of the eIF4F complex, is still poorly understood. Here, we demonstrate that IBTK, a substrate-binding adaptor of the Cullin 3-RING ubiquitin ligase (CRL3) complex, interacts with eIF4A1. The non-degradative ubiquitination of eIF4A1 catalyzed by the CRL3IBTK complex promotes cap-dependent translational initiation, nascent protein synthesis, oncogene expression, and cervical tumor cell growth both in vivo and in vitro. Moreover, we show that mTORC1 and S6K1, two key regulators of protein synthesis, directly phosphorylate IBTK to augment eIF4A1 ubiquitination and sustained oncogenic translation. This link between the CRL3IBTK complex and the mTORC1/S6K1 signaling pathway, which is frequently dysregulated in cancer, represents a promising target for anti-cancer therapies.